Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potrx010549g00050
View in Genome Browser
Position
Potrx010549:40340-41148 (-)
808bp
Gene Type
gene
Gene Description (Protein Product)
LOB domain-containing protein
Organism
Populus tremula x Populus tremuloides
Also AS Potri.010G177100AT1G65620Potri.010G177100.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx057988g00010 LOB domain-containing protein
Potrx063298g00020 Polycomb group protein
Potrx039741g00010 Polycomb group protein EMBRYONIC FLOWER
Regulatory gene
Potrx000087g00010 ZINC FINGER protein
Potrx000192g00030 ZINC FINGER protein
Potrx000341g00010 NAC domain-containing protein
Target gene
Potrx000326g00020 transcription factor
Potrx000416g00030 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Potrx000460g00010 Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)