Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Potrx029422g00010
View in Genome Browser
Position
Potrx029422:2032-3133 (+)
1101bp
Gene Type
gene
Gene Description (Protein Product)
"zinc-finger of the FCS-type
Organism
Populus tremula x Populus tremuloides
Also AS Potri.002G050800AT3G22550Potri.002G050800.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx066058g00030 Monothiol glutaredoxin-S16
Potrx049315g00010 mitogen-activated protein kinase
Potrx058735g00010 mitogen-activated protein kinase
Regulatory gene
Potrx000128g00010 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Potrx000259g00020 B3 domain-containing transcription factor
Potrx000718g00010 B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000932 P-body CC
GO:0001101 response to acid chemical BP
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009791 post-embryonic development BP
GO:0010033 response to organic substance BP
GO:0010154 fruit development BP
GO:0010162 seed dormancy process BP
GO:0010431 seed maturation BP
GO:0010494 cytoplasmic stress granule CC
GO:0021700 developmental maturation BP
GO:0022414 reproductive process BP
GO:0022611 dormancy process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0032991 protein-containing complex CC
GO:0033993 response to lipid BP
GO:0035770 ribonucleoprotein granule CC
GO:0036464 cytoplasmic ribonucleoprotein granule CC
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048316 seed development BP
GO:0048608 reproductive structure development BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050896 response to stimulus BP
GO:0061458 reproductive system development BP
GO:0071695 anatomical structure maturation BP
GO:0097305 response to alcohol BP
GO:1901700 response to oxygen-containing compound BP
GO:1990904 ribonucleoprotein complex CC