Basic Information
Gene ID
Potrx038638g00020
Position
Potrx038638:4585-9850 (-)
5265bp
Gene Type
gene
Gene Description (Protein Product)
hydroxyproline O-arabinosyltransferase activity
Organism
Also AS Potri.001G275600AT5G13500Potri.001G275600.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx065925g00060 hydroxyproline O-arabinosyltransferase activity
Potrx055061g00010 hydroxyproline O-arabinosyltransferase activity
Potrx060256g00030 UDP-D-xylose L-fucose alpha-1,3-D-xylosyltransferase 2-like
Regulatory gene
Potrx000259g00020 B3 domain-containing transcription factor
Potrx000718g00010 B3 DNA binding domain
Potrx000925g00010 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map00514 Other types of O-glycan biosynthesis O-mannosyl glycans are a type of O-glycans that are found both in eukaryotes and prokaryotes. Biosynthesis of O-mannosyl glycans is initiated by the transfer of mannose from Man-P-Dol to serine or threonine residue, which is catalyzed by protein O-mannosyltransferases POMT1 and POMT2. Defects of these genes are linked to human diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].