Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Potrx053777g00010
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Position
Potrx053777:6-5459 (-)
5453bp
Gene Type
gene
Gene Description (Protein Product)
Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Organism
Populus tremula x Populus tremuloides
Also AS Potri.003G163600AT5G62000Potri.003G163600.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx065982g00010 Topless-related protein
Potrx054874g00010 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Potrx055934g00010 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Regulatory gene
Potrx000087g00010 ZINC FINGER protein
Potrx000106g00010 MADS-box protein
Potrx000192g00030 ZINC FINGER protein
Target gene
Potrx000044g00010 Inactive leucine-rich repeat receptor-like protein kinase
Potrx000123g00010 Protein of unknown function (DUF3531)
Potrx000150g00010

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map04075 Plant hormone signal transduction -