Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potrx057303g00010
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Position
Potrx057303:12346-17094 (+)
4748bp
Gene Type
gene
Gene Description (Protein Product)
SANTA (SANT Associated)
Organism
Populus tremula x Populus tremuloides
Also AS Potri.004G077400AT5G02520Potri.004G077400.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx065514g00010 L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like
Potrx065956g00020 Belongs to the DEAD box helicase family
Potrx063053g00040 RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)