Basic Information
Gene ID
Potrx058157g00020
Position
Potrx058157:16827-21852 (-)
5025bp
Gene Type
gene
Gene Description (Protein Product)
PHD finger protein ALFIN-LIKE
Organism
Also AS Potri.008G069200AT5G05610Potri.008G069200.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx059078g00010 Phd finger protein
Potrx064167g00010 PHD finger protein ALFIN-LIKE
Potrx064862g00010 PHD finger protein ALFIN-LIKE

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0001067 transcription regulatory region nucleic acid binding MF
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0035064 methylated histone binding MF
GO:0042393 histone binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043565 sequence-specific DNA binding MF
GO:0044212 transcription cis-regulatory region binding MF
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0097159 organic cyclic compound binding MF
GO:0140030 modification-dependent protein binding MF
GO:0140034 methylation-dependent protein binding MF
GO:1901363 heterocyclic compound binding MF