Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Potrx060701g00010
View in Genome Browser
Position
Potrx060701:29-754 (-)
725bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the adaptor complexes medium subunit family
Organism
Populus tremula x Populus tremuloides
Also AS Potri.010G044700AT1G60780Potri.010G044700.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx063877g00040 Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
Potrx063829g00020 Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
Potrx062904g00010 Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi trans-Golgi network (TGN) and or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0002119 nematode larval development BP
GO:0002164 larval development BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0005798 Golgi-associated vesicle CC
GO:0005829 cytosol CC
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009792 embryo development ending in birth or egg hatching BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0012506 vesicle membrane CC
GO:0012510 trans-Golgi network transport vesicle membrane CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0022607 cellular component assembly BP
GO:0030030 cell projection organization BP
GO:0030031 cell projection assembly BP
GO:0030117 membrane coat CC
GO:0030118 clathrin coat CC
GO:0030119 AP-type membrane coat adaptor complex CC
GO:0030120 vesicle coat CC
GO:0030121 AP-1 adaptor complex CC
GO:0030125 clathrin vesicle coat CC
GO:0030130 clathrin coat of trans-Golgi network vesicle CC
GO:0030131 clathrin adaptor complex CC
GO:0030133 transport vesicle CC
GO:0030135 coated vesicle CC
GO:0030136 clathrin-coated vesicle CC
GO:0030140 trans-Golgi network transport vesicle CC
GO:0030658 transport vesicle membrane CC
GO:0030659 cytoplasmic vesicle membrane CC
GO:0030660 Golgi-associated vesicle membrane CC
GO:0030662 coated vesicle membrane CC
GO:0030665 clathrin-coated vesicle membrane CC
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034613 protein localization BP
GO:0040025 vulval development BP
GO:0042886 amide transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044782 cilium organization BP
GO:0045176 apical protein localization BP
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0048475 coated membrane CC
GO:0048513 animal organ development BP
GO:0048569 post-embryonic animal organ development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0060271 cilium assembly BP
GO:0061512 protein localization to cilium BP
GO:0070727 cellular macromolecule localization BP
GO:0070925 organelle assembly BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072657 protein localization to membrane BP
GO:0097499 protein localization to non-motile cilium BP
GO:0097500 receptor localization to non-motile cilium BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
GO:0120031 plasma membrane bounded cell projection assembly BP
GO:0120036 plasma membrane bounded cell projection organization BP
GO:1903441 protein localization to ciliary membrane BP
GO:1990778 protein localization to cell periphery BP