Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Potrx064330g00020
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Position
Potrx064330:9159-10108 (-)
949bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the Casparian strip membrane proteins (CASP) family
Organism
Populus tremula x Populus tremuloides
Also AS Potri.001G442300AT5G44550Potri.001G442300.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx066365g00030 1-acyl-sn-glycerol-3-phosphate acyltransferase
Potrx216354g00010 Late embryogenesis abundant protein
Potrx065351g00020 Belongs to the ubiquitin-conjugating enzyme family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0016020 membrane CC
GO:0044464 obsolete cell part CC
GO:0048037 obsolete cofactor binding MF
GO:0051536 iron-sulfur cluster binding MF
GO:0051540 metal cluster binding MF
GO:0071944 cell periphery CC