PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Potrx065410g00060 View in Genome Browser
Position	Potrx065410:32358-33503 (-) 1145bp
Gene Type	gene
Gene Description (Protein Product)	PLAC8 family
Organism	Populus tremula x Populus tremuloides
Also AS	Potri.012G092200AT1G14870Potri.012G092200.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Potrx215625g00060 Ribosomal protein S7, mitochondrial

Potrx212868g00110 ribosomal protein S7

Potrx212868g00110 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0008150	biological_process	BP
GO:0008285	negative regulation of cell population proliferation	BP
GO:0042127	regulation of cell population proliferation	BP
GO:0048519	negative regulation of biological process	BP
GO:0048523	negative regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0065007	biological regulation	BP