Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Potrx065652g00020
View in Genome Browser
Position
Potrx065652:15536-16741 (-)
1205bp
Gene Type
gene
Gene Description (Protein Product)
dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity
Organism
Populus tremula x Populus tremuloides
Also AS Potri.001G008600Potri.001G008600.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx066249g00010 V-type proton ATPase catalytic subunit
Potrx065835g00020 UDP-N-acetylglucosamine transferase subunit ALG13 homolog
Potrx066077g00010 Belongs to the glycosyl hydrolase 47 family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000030 mannosyltransferase activity MF
GO:0001654 eye development BP
GO:0001745 compound eye morphogenesis BP
GO:0001751 compound eye photoreceptor cell differentiation BP
GO:0001754 eye photoreceptor cell differentiation BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004376 glycolipid mannosyltransferase activity MF
GO:0004584 obsolete dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0005886 plasma membrane CC
GO:0006464 protein modification process BP
GO:0006497 protein lipidation BP
GO:0006505 GPI anchor metabolic process BP
GO:0006506 GPI anchor biosynthetic process BP
GO:0006629 lipid metabolic process BP
GO:0006643 membrane lipid metabolic process BP
GO:0006644 phospholipid metabolic process BP
GO:0006650 glycerophospholipid metabolic process BP
GO:0006661 phosphatidylinositol biosynthetic process BP
GO:0006664 glycolipid metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007029 endoplasmic reticulum organization BP
GO:0007275 multicellular organism development BP
GO:0007399 nervous system development BP
GO:0007423 sensory organ development BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008610 lipid biosynthetic process BP
GO:0008654 phospholipid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009247 glycolipid biosynthetic process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009887 animal organ morphogenesis BP
GO:0009987 cellular process BP
GO:0010256 endomembrane system organization BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016043 cellular component organization BP
GO:0016254 preassembly of GPI anchor in ER membrane BP
GO:0016740 transferase activity MF
GO:0016757 glycosyltransferase activity MF
GO:0016758 hexosyltransferase activity MF
GO:0019538 protein metabolic process BP
GO:0019637 organophosphate metabolic process BP
GO:0022008 neurogenesis BP
GO:0030154 cell differentiation BP
GO:0030176 obsolete integral component of endoplasmic reticulum membrane CC
GO:0030182 neuron differentiation BP
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031227 obsolete intrinsic component of endoplasmic reticulum membrane CC
GO:0031501 mannosyltransferase complex CC
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034613 protein localization BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0036211 protein modification process BP
GO:0042051 compound eye photoreceptor development BP
GO:0042052 rhabdomere development BP
GO:0042157 lipoprotein metabolic process BP
GO:0042158 lipoprotein biosynthetic process BP
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0042461 photoreceptor cell development BP
GO:0042462 eye photoreceptor cell development BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044085 cellular component biogenesis BP
GO:0044091 membrane biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045017 glycerolipid biosynthetic process BP
GO:0045048 protein insertion into ER membrane BP
GO:0045052 protein insertion into ER membrane by GPI attachment sequence BP
GO:0045184 establishment of protein localization BP
GO:0045313 rhabdomere membrane biogenesis BP
GO:0046467 membrane lipid biosynthetic process BP
GO:0046474 glycerophospholipid biosynthetic process BP
GO:0046486 glycerolipid metabolic process BP
GO:0046488 phosphatidylinositol metabolic process BP
GO:0046530 photoreceptor cell differentiation BP
GO:0048468 cell development BP
GO:0048513 animal organ development BP
GO:0048592 eye morphogenesis BP
GO:0048666 neuron development BP
GO:0048699 generation of neurons BP
GO:0048731 system development BP
GO:0048749 compound eye development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0051179 localization BP
GO:0051205 protein insertion into membrane BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0061024 membrane organization BP
GO:0070085 glycosylation BP
GO:0070727 cellular macromolecule localization BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072657 protein localization to membrane BP
GO:0090150 establishment of protein localization to membrane BP
GO:0090407 organophosphate biosynthetic process BP
GO:0090596 sensory organ morphogenesis BP
GO:0097502 mannosylation BP
GO:0098827 endoplasmic reticulum subcompartment CC
GO:0120097 glycosylphosphatidylinositol-mannosyltransferase II complex CC
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1902494 catalytic complex CC
GO:1903509 liposaccharide metabolic process BP
GO:1990234 transferase complex CC
KEGG Term Name Description
map03050 Proteasome The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
map01100 Metabolic pathways -
map00563 Glycosylphosphatidylinositol(GPI)-anchor biosynthesis Cell surface proteins can be attached to the cell membrane via the glycolipid structure called glycosylphosphatidylinositol (GPI) anchor. Hundreds of GPI-anchored proteins have been identified in many eukaryotes ranging from protozoa and fungi to mammals. All protein-linked GPI anchors share a common core structure, characterized by the substructure Man (a1-4) GlcN (a1-6) myo-inositol-1P-lipid. Biosynthesis of GPI anchors proceeds in three stages: (i) preassembly of a GPI precursor in the ER membrane, (ii) attachment of the GPI to the C-terminus of a newly synthesized protein in the lumen of the ER, and (iii) lipid remodeling and/or carbohydrate side-chain modifications in the ER and the Golgi. Defects of GPI anchor biosynthesis gene result in a genetic disorder, paroxysmal nocturnal hemoglobinuria.