Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Potrx214872g00050
View in Genome Browser
Position
Potrx214872:45715-46188 (+)
473bp
Gene Type
gene
Gene Description (Protein Product)
ATP synthase protein YMF19
Organism
Populus tremula x Populus tremuloides
Also AS Potri.011G045912ATMG00480Potri.011G045912.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx215919g00190 ATP synthase subunit beta
Potrx216632g00080 ATP synthase subunit C
Potrx215155g00010 Cytochrome C oxidase, subunit

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) CC
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005743 mitochondrial inner membrane CC
GO:0005753 mitochondrial proton-transporting ATP synthase complex CC
GO:0005773 vacuole CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0016020 membrane CC
GO:0016469 proton-transporting two-sector ATPase complex CC
GO:0019866 organelle inner membrane CC
GO:0031090 organelle membrane CC
GO:0031966 mitochondrial membrane CC
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0032991 protein-containing complex CC
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain CC
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044455 obsolete mitochondrial membrane part CC
GO:0044464 obsolete cell part CC
GO:0045259 proton-transporting ATP synthase complex CC
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) CC
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0050897 cobalt ion binding MF
GO:0098796 membrane protein complex CC
GO:0098798 mitochondrial protein-containing complex CC
GO:0098800 inner mitochondrial membrane protein complex CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00195 Photosynthesis Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
map00190 Oxidative phosphorylation -