PPGR - Gene Detail

Basic Information

Gene ID	Potrs010535g15596 View in Genome Browser
Position	Potrs010535:2167-3778 (+) 1611bp
Gene Type	gene
Gene Description (Protein Product)	Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Organism	Populus tremuloides
Also AS	Potri.002G045000AT5G43700Potri.002G045000.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Potrs013029g28189 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

Potrs018964g21193 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

Potrs019173g21474 Protein TRANSPORT INHIBITOR RESPONSE

Regulatory gene

Potrs000984g01639 GAGA binding protein-like family

Potrs000984g01640 GAGA binding protein-like family

Potrs002956g04589 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0008150	biological_process	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009733	response to auxin	BP
GO:0010033	response to organic substance	BP
GO:0042221	response to chemical	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP

KEGG Term	Name	Description
map04075	Plant hormone signal transduction	-