PPGR - Gene Detail

Gene ID	Potrs014720g18296 View in Genome Browser
Position	Potrs014720:1820-7357 (+) 5537bp
Gene Type	gene
Gene Description (Protein Product)	Phosphatidylinositol glycan anchor biosynthesis class U
Organism	Populus tremuloides
Also AS	Potri.001G109200AT1G63110Potri.001G109200.v4.1

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Potrs040735g25693 Glycosylphosphatidylinositol anchor attachment 1 Potrs037691g24513 PGAP1-like protein Potrs040913g27917 GPI transamidase component
Regulatory gene	Potrs000389g00482 Dof domain, zinc finger Potrs000883g01405 dof zinc finger protein Potrs000913g29758 Dof zinc finger protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005789	endoplasmic reticulum membrane	CC
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0016021	membrane	CC
GO:0030176	obsolete integral component of endoplasmic reticulum membrane	CC
GO:0031224	obsolete intrinsic component of membrane	CC
GO:0031227	obsolete intrinsic component of endoplasmic reticulum membrane	CC
GO:0031984	organelle subcompartment	CC
GO:0032991	protein-containing complex	CC
GO:0042175	nuclear outer membrane-endoplasmic reticulum membrane network	CC
GO:0042765	GPI-anchor transamidase complex	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044432	obsolete endoplasmic reticulum part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0098796	membrane protein complex	CC
GO:0098827	endoplasmic reticulum subcompartment	CC
GO:1902494	catalytic complex	CC

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00563	Glycosylphosphatidylinositol(GPI)-anchor biosynthesis	Cell surface proteins can be attached to the cell membrane via the glycolipid structure called glycosylphosphatidylinositol (GPI) anchor. Hundreds of GPI-anchored proteins have been identified in many eukaryotes ranging from protozoa and fungi to mammals. All protein-linked GPI anchors share a common core structure, characterized by the substructure Man (a1-4) GlcN (a1-6) myo-inositol-1P-lipid. Biosynthesis of GPI anchors proceeds in three stages: (i) preassembly of a GPI precursor in the ER membrane, (ii) attachment of the GPI to the C-terminus of a newly synthesized protein in the lumen of the ER, and (iii) lipid remodeling and/or carbohydrate side-chain modifications in the ER and the Golgi. Defects of GPI anchor biosynthesis gene result in a genetic disorder, paroxysmal nocturnal hemoglobinuria.