Basic Information
Gene ID
Potrs016480g19192
Position
Potrs016480:795-2660 (+)
1865bp
Gene Type
gene
Gene Description (Protein Product)
U4 U6 small nuclear ribonucleoprotein
Organism
Also AS Potri.014G102800AT1G60170Potri.014G102800.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs039873g33521 Small nuclear ribonucleoprotein
Potrs040959g27603 Small nuclear ribonucleoprotein
Regulatory gene
Potrs000124g00190 B3 DNA binding domain
Potrs000130g30685 PHD zinc finger
Potrs000223g35534 Myb/SANT-like DNA-binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.