PPGR - Gene Detail

Basic Information

Gene ID	Potrs016752g19354 View in Genome Browser
Position	Potrs016752:8937-9352 (-) 415bp
Gene Type	gene
Gene Description (Protein Product)	"The light-harvesting complex (LHC) functions as a light receptor
Organism	Populus tremuloides
Also AS	Potri.014G172400AT1G61520Potri.014G172400.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Potrs018277g20477 The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated

Potrs042937g27017 The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated

Potrs017511g19767 The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated

Regulatory gene

Potrs000389g00482 Dof domain, zinc finger

Potrs000883g01405 dof zinc finger protein

Potrs000913g29758 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006091	generation of precursor metabolites and energy	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009314	response to radiation	BP
GO:0009416	response to light stimulus	BP
GO:0009507	chloroplast	CC
GO:0009526	plastid envelope	CC
GO:0009532	plastid stroma	CC
GO:0009534	chloroplast thylakoid	CC
GO:0009535	chloroplast thylakoid membrane	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009579	thylakoid	CC
GO:0009628	response to abiotic stimulus	BP
GO:0009765	photosynthesis, light harvesting	BP
GO:0009768	photosynthesis, light harvesting in photosystem I	BP
GO:0009941	chloroplast envelope	CC
GO:0009987	cellular process	BP
GO:0010287	plastoglobule	CC
GO:0015979	photosynthesis	BP
GO:0016020	membrane	CC
GO:0016168	chlorophyll binding	MF
GO:0019684	photosynthesis, light reaction	BP
GO:0031409	pigment binding	MF
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0031976	plastid thylakoid	CC
GO:0031984	organelle subcompartment	CC
GO:0034357	photosynthetic membrane	CC
GO:0042651	thylakoid membrane	CC
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044436	obsolete thylakoid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046906	tetrapyrrole binding	MF
GO:0048037	obsolete cofactor binding	MF
GO:0050896	response to stimulus	BP
GO:0055035	plastid thylakoid membrane	CC
GO:0097159	organic cyclic compound binding	MF
GO:1901363	heterocyclic compound binding	MF

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00196	Photosynthesis - antenna proteins	The chlorophyll-binding subunits of photosystems I and II are internal antenna light-harvesting proteins of oxygenic photosynthesis. The antenna proteins that exist in phycobilisomes in cyanobacteria and light-harvesting chlorophyll protein complexes in green plants act as peripheral antenna systems, enabling more efficient absorption of light energy.