Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potrs017759g20029
View in Genome Browser
Position
Potrs017759:11654-11948 (-)
294bp
Gene Type
gene
Gene Description (Protein Product)
"proton-transporting ATP synthase activity
Organism
Populus tremuloides
Also AS Potri.007G062142ATCG00470Potri.007G062142.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs042058g26400 ATP synthase delta chain
Potrs146796g32985 ATP synthase subunit beta
Potrs148139g27403 ATP synthase subunit beta
Regulatory gene
Potrs000045g00007 transcription factor
Potrs000160g00198 AP2-like ethylene-responsive transcription factor
Potrs000389g00482 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) CC
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005215 transporter activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005743 mitochondrial inner membrane CC
GO:0005753 mitochondrial proton-transporting ATP synthase complex CC
GO:0005756 mitochondrial proton-transporting ATP synthase, central stalk CC
GO:0005759 mitochondrial matrix CC
GO:0006091 generation of precursor metabolites and energy BP
GO:0006119 oxidative phosphorylation BP
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006163 purine nucleotide metabolic process BP
GO:0006164 purine nucleotide biosynthetic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006754 ATP biosynthetic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006839 mitochondrial transport BP
GO:0006996 organelle organization BP
GO:0007005 mitochondrion organization BP
GO:0007006 mitochondrial membrane organization BP
GO:0007007 inner mitochondrial membrane organization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0009058 biosynthetic process BP
GO:0009117 nucleotide metabolic process BP
GO:0009123 nucleoside monophosphate metabolic process BP
GO:0009124 nucleoside monophosphate biosynthetic process BP
GO:0009126 purine nucleoside monophosphate metabolic process BP
GO:0009127 purine nucleoside monophosphate biosynthetic process BP
GO:0009141 nucleoside triphosphate metabolic process BP
GO:0009142 nucleoside triphosphate biosynthetic process BP
GO:0009144 purine nucleoside triphosphate metabolic process BP
GO:0009145 purine nucleoside triphosphate biosynthetic process BP
GO:0009150 purine ribonucleotide metabolic process BP
GO:0009152 purine ribonucleotide biosynthetic process BP
GO:0009156 ribonucleoside monophosphate biosynthetic process BP
GO:0009161 ribonucleoside monophosphate metabolic process BP
GO:0009165 nucleotide biosynthetic process BP
GO:0009167 purine ribonucleoside monophosphate metabolic process BP
GO:0009168 purine ribonucleoside monophosphate biosynthetic process BP
GO:0009199 ribonucleoside triphosphate metabolic process BP
GO:0009201 ribonucleoside triphosphate biosynthetic process BP
GO:0009205 purine ribonucleoside triphosphate metabolic process BP
GO:0009206 purine ribonucleoside triphosphate biosynthetic process BP
GO:0009259 ribonucleotide metabolic process BP
GO:0009260 ribonucleotide biosynthetic process BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015077 inorganic cation transmembrane transporter activity MF
GO:0015078 proton transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015399 primary active transmembrane transporter activity MF
GO:0015405 ATPase-coupled transmembrane transporter activity MF
GO:0015672 inorganic cation transmembrane transport BP
GO:0015985 energy coupled proton transport, down electrochemical gradient BP
GO:0015986 proton motive force-driven ATP synthesis BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016043 cellular component organization BP
GO:0016310 phosphorylation BP
GO:0016462 pyrophosphatase activity MF
GO:0016469 proton-transporting two-sector ATPase complex CC
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0017144 xenobiotic metabolic process BP
GO:0018130 heterocycle biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019637 organophosphate metabolic process BP
GO:0019693 ribose phosphate metabolic process BP
GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity MF
GO:0019866 organelle inner membrane CC
GO:0022804 active transmembrane transporter activity MF
GO:0022853 active monoatomic ion transmembrane transporter activity MF
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0031090 organelle membrane CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031966 mitochondrial membrane CC
GO:0031967 organelle envelope CC
GO:0031974 membrane-enclosed lumen CC
GO:0031975 envelope CC
GO:0032991 protein-containing complex CC
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain CC
GO:0034220 monoatomic ion transmembrane transport BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0042221 response to chemical BP
GO:0042407 cristae formation BP
GO:0042623 ATP hydrolysis activity MF
GO:0042625 ATPase-coupled ion transmembrane transporter activity MF
GO:0042626 ATPase-coupled transmembrane transporter activity MF
GO:0042776 proton motive force-driven mitochondrial ATP synthesis BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043492 ATPase-coupled transmembrane transporter activity MF
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044455 obsolete mitochondrial membrane part CC
GO:0044464 obsolete cell part CC
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism MF
GO:0044877 protein-containing complex binding MF
GO:0045259 proton-transporting ATP synthase complex CC
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) CC
GO:0045269 proton-transporting ATP synthase, central stalk CC
GO:0046034 ATP metabolic process BP
GO:0046390 ribose phosphate biosynthetic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046688 response to copper ion BP
GO:0046907 intracellular transport BP
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism MF
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0055085 transmembrane transport BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0061024 membrane organization BP
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072521 purine-containing compound metabolic process BP
GO:0072522 purine-containing compound biosynthetic process BP
GO:0090407 organophosphate biosynthetic process BP
GO:0090662 transmembrane transport BP
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098662 inorganic cation transmembrane transport BP
GO:0098796 membrane protein complex CC
GO:0098798 mitochondrial protein-containing complex CC
GO:0098800 inner mitochondrial membrane protein complex CC
GO:0099131 monoatomic ion transmembrane transport BP
GO:0099132 monoatomic cation transmembrane transport BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901293 nucleoside phosphate biosynthetic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1902600 proton transmembrane transport BP
GO:1990542 mitochondrial transmembrane transport BP
KEGG Term Name Description
map03008 Ribosome biogenesis in eukaryotes Ribosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It requires hundreds of factors not present in the mature particle. In the absence of these proteins, ribosome biogenesis is stalled and cell growth is terminated even under optimal growth conditions. The primary pre-rRNA transcript is assembled into the 90S pre-ribosome, which contains both 40S and 60S assembly factors. Within this complex, the pre-rRNA is cleaved. pre-60S ribosomes are subjected to several sequential processing steps in the nucleoplasm involving numerous assembly intermediates before it is exported to the cytoplasm and matured into the 60S ribosomal subunit. The pre-40S ribosome is matured to the small ribosomal subunit in the cytoplasm by cleavage.
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map00195 Photosynthesis Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
map00195 Photosynthesis Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
map00190 Oxidative phosphorylation -
map00190 Oxidative phosphorylation -
map00190 Oxidative phosphorylation -