Basic Information
Gene ID
Potrs018780g20966
Position
Potrs018780:4616-8289 (-)
3673bp
Gene Type
gene
Gene Description (Protein Product)
Arginine serine-rich-splicing factor
Organism
Also AS Potri.002G153600AT4G25500Potri.002G153600.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs037433g31131 serine arginine-rich splicing factor
Potrs031114g23601 splicing factor
Potrs040959g27603 Small nuclear ribonucleoprotein
Regulatory gene
Potrs000049g00221 Transcription factor
Potrs000049g00222 Transcription factor
Potrs000061g00029 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.