Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potrs018978g21165
View in Genome Browser
Position
Potrs018978:1706-6548 (-)
4842bp
Gene Type
gene
Gene Description (Protein Product)
Glutamate-cysteine ligase
Organism
Populus tremuloides
Also AS Potri.001G104500AT4G23100Potri.001G104500.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs019371g21812 Belongs to the cysteine synthase cystathionine beta- synthase family
Potrs035706g24088 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Potrs039722g25201 Catalyzes the formation of 5-oxoproline from gamma- glutamyl dipeptides and plays a significant role in glutathione (GSH) homeostasis
Regulatory gene
Potrs000389g00482 Dof domain, zinc finger
Potrs000883g01405 dof zinc finger protein
Potrs000913g29758 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000302 response to reactive oxygen species BP
GO:0001101 response to acid chemical BP
GO:0002213 defense response to insect BP
GO:0002376 immune system process BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004357 glutamate-cysteine ligase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006082 organic acid metabolic process BP
GO:0006518 peptide metabolic process BP
GO:0006575 cellular modified amino acid metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006749 glutathione metabolic process BP
GO:0006750 glutathione biosynthetic process BP
GO:0006790 sulfur compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006955 immune response BP
GO:0006979 response to oxidative stress BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009266 response to temperature stimulus BP
GO:0009403 toxin biosynthetic process BP
GO:0009404 toxin metabolic process BP
GO:0009408 response to heat BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009620 response to fungus BP
GO:0009628 response to abiotic stimulus BP
GO:0009700 indole phytoalexin biosynthetic process BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009753 response to jasmonic acid BP
GO:0009791 post-embryonic development BP
GO:0009814 defense response to other organism BP
GO:0009816 defense response to bacterium BP
GO:0009908 flower development BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010193 response to ozone BP
GO:0016043 cellular component organization BP
GO:0016143 S-glycoside metabolic process BP
GO:0016144 S-glycoside biosynthetic process BP
GO:0016874 ligase activity MF
GO:0016879 ligase activity, forming carbon-nitrogen bonds MF
GO:0016881 acid-amino acid ligase activity MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019184 nonribosomal peptide biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019748 secondary metabolic process BP
GO:0019757 glycosinolate metabolic process BP
GO:0019758 glycosinolate biosynthetic process BP
GO:0019760 glucosinolate metabolic process BP
GO:0019761 glucosinolate biosynthetic process BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033036 macromolecule localization BP
GO:0033037 polysaccharide localization BP
GO:0033554 cellular response to stress BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042221 response to chemical BP
GO:0042398 cellular modified amino acid biosynthetic process BP
GO:0042430 indole-containing compound metabolic process BP
GO:0042435 indole-containing compound biosynthetic process BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042545 cell wall modification BP
GO:0042742 defense response to bacterium BP
GO:0043043 peptide biosynthetic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044272 sulfur compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044550 secondary metabolite biosynthetic process BP
GO:0045087 innate immune response BP
GO:0045229 external encapsulating structure organization BP
GO:0046217 indole phytoalexin metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046677 response to antibiotic BP
GO:0046686 response to cadmium ion BP
GO:0048367 shoot system development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050832 defense response to fungus BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051188 obsolete cofactor biosynthetic process BP
GO:0051641 cellular localization BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0052314 phytoalexin metabolic process BP
GO:0052315 phytoalexin biosynthetic process BP
GO:0052386 cell wall thickening BP
GO:0052482 defense response by cell wall thickening BP
GO:0052542 defense response by callose deposition BP
GO:0052543 callose deposition in cell wall BP
GO:0052544 defense response by callose deposition in cell wall BP
GO:0052545 callose localization BP
GO:0061458 reproductive system development BP
GO:0070727 cellular macromolecule localization BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071555 cell wall organization BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090567 reproductive shoot system development BP
GO:0098542 defense response to other organism BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901657 glycosyl compound metabolic process BP
GO:1901659 glycosyl compound biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00480 Glutathione metabolism -
map00270 Cysteine and methionine metabolism Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].