PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	Potrs034055g23857 View in Genome Browser
Position	Potrs034055:2948-8618 (+) 5670bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the formin-like family
Organism	Populus tremuloides
Also AS	Potri.002G240232AT2G43800AT3G25500Potri.002G240232.v4.1

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Potrs042300g26581 domain in glucosyltransferases, myotubularins and other putative membrane-associated proteins

Potrs037812g24549 Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations

Potrs040582g25645 Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations

Regulatory gene

Potrs000221g00273 Zinc-finger homeodomain protein

Potrs000389g00482 Dof domain, zinc finger

Potrs000883g01405 dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003779	actin binding	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0006996	organelle organization	BP
GO:0007010	cytoskeleton organization	BP
GO:0007015	actin filament organization	BP
GO:0008064	regulation of actin polymerization or depolymerization	BP
GO:0008092	cytoskeletal protein binding	MF
GO:0008150	biological_process	BP
GO:0009987	cellular process	BP
GO:0010638	positive regulation of organelle organization	BP
GO:0010639	negative regulation of organelle organization	BP
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0030029	actin filament-based process	BP
GO:0030036	actin cytoskeleton organization	BP
GO:0030312	external encapsulating structure	CC
GO:0030832	regulation of actin filament length	BP
GO:0030833	regulation of actin filament polymerization	BP
GO:0030834	regulation of actin filament depolymerization	BP
GO:0030835	negative regulation of actin filament depolymerization	BP
GO:0030837	negative regulation of actin filament polymerization	BP
GO:0030838	positive regulation of actin filament polymerization	BP
GO:0031333	negative regulation of protein-containing complex assembly	BP
GO:0031334	positive regulation of protein-containing complex assembly	BP
GO:0032271	regulation of protein polymerization	BP
GO:0032272	negative regulation of protein polymerization	BP
GO:0032273	positive regulation of protein polymerization	BP
GO:0032535	regulation of cellular component size	BP
GO:0032956	regulation of actin cytoskeleton organization	BP
GO:0032970	regulation of actin filament-based process	BP
GO:0033043	regulation of organelle organization	BP
GO:0043242	negative regulation of protein-containing complex disassembly	BP
GO:0043244	regulation of protein-containing complex disassembly	BP
GO:0043254	regulation of protein-containing complex assembly	BP
GO:0044087	regulation of cellular component biogenesis	BP
GO:0044089	positive regulation of cellular component biogenesis	BP
GO:0044464	obsolete cell part	CC
GO:0044877	protein-containing complex binding	MF
GO:0045010	actin nucleation	BP
GO:0048518	positive regulation of biological process	BP
GO:0048519	negative regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0048523	negative regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051015	actin filament binding	MF
GO:0051016	barbed-end actin filament capping	BP
GO:0051128	regulation of cellular component organization	BP
GO:0051129	negative regulation of cellular component organization	BP
GO:0051130	positive regulation of cellular component organization	BP
GO:0051493	regulation of cytoskeleton organization	BP
GO:0051494	negative regulation of cytoskeleton organization	BP
GO:0051495	positive regulation of cytoskeleton organization	BP
GO:0051693	actin filament capping	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0090066	regulation of anatomical structure size	BP
GO:0097435	supramolecular fiber organization	BP
GO:0110053	regulation of actin filament organization	BP
GO:1901879	regulation of protein depolymerization	BP
GO:1901880	negative regulation of protein depolymerization	BP
GO:1902903	regulation of supramolecular fiber organization	BP
GO:1902904	negative regulation of supramolecular fiber organization	BP
GO:1902905	positive regulation of supramolecular fiber organization	BP