Basic Information
Gene ID
Potrs035328g24032
Position
Potrs035328:6072-6188 (+)
116bp
Gene Type
gene
Gene Description (Protein Product)
PHAX RNA-binding domain
Organism
Also AS Potri.006G232800AT3G20430Potri.006G232800.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs042833g26979 Nuclear cap-binding protein subunit
Potrs042997g27085 Rae1-like protein
Potrs037813g37970 Nsp1-like C-terminal region
Regulatory gene
Potrs000037g00005 methyltransferase At2g41040, chloroplastic-like
Potrs000045g00007 transcription factor
Potrs000108g00058 Protein TRANSPARENT TESTA

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.