Basic Information
Gene ID
Potrs037157g24375
Position
Potrs037157:3-1872 (-)
1869bp
Gene Type
gene
Gene Description (Protein Product)
Arginine serine-rich-splicing factor
Organism
Also AS Potri.002G175000AT3G61860Potri.002G175000.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs037433g31131 serine arginine-rich splicing factor
Potrs040959g27603 Small nuclear ribonucleoprotein
Regulatory gene
Potrs000221g00273 Zinc-finger homeodomain protein
Potrs000223g35534 Myb/SANT-like DNA-binding domain
Potrs000389g00482 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.