Basic Information
Gene ID
Potrs039276g25050
Position
Potrs039276:1-1407 (-)
1406bp
Gene Type
gene
Gene Description (Protein Product)
Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis
Organism
Also AS Potri.007G064800AT3G55620Potri.007G064800.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs042626g26830 methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits
Potrs039296g25061 Ribosomal L37ae protein family
Potrs041894g26289 60S ribosomal Protein
Regulatory gene
Potrs000335g00445 Homeobox-leucine zipper protein GLABRA
Potrs000370g00459 Homeobox-leucine zipper protein
Potrs000389g00482 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03008 Ribosome biogenesis in eukaryotes Ribosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It requires hundreds of factors not present in the mature particle. In the absence of these proteins, ribosome biogenesis is stalled and cell growth is terminated even under optimal growth conditions. The primary pre-rRNA transcript is assembled into the 90S pre-ribosome, which contains both 40S and 60S assembly factors. Within this complex, the pre-rRNA is cleaved. pre-60S ribosomes are subjected to several sequential processing steps in the nucleoplasm involving numerous assembly intermediates before it is exported to the cytoplasm and matured into the 60S ribosomal subunit. The pre-40S ribosome is matured to the small ribosomal subunit in the cytoplasm by cleavage.