PPGR - Gene Detail

Basic Information

Gene ID	Potrs039417g25111 View in Genome Browser
Position	Potrs039417:8538-8897 (-) 359bp
Gene Type	gene
Gene Description (Protein Product)	50S ribosomal protein
Organism	Populus tremuloides
Also AS	Potri.002G112500AT5G17870Potri.002G112500.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Potrs041715g26192 -

Potrs145222g37425 One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation

Potrs148139g27414 One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation

Regulatory gene

Potrs000037g00005 methyltransferase At2g41040, chloroplastic-like

Potrs000108g00058 Protein TRANSPARENT TESTA

Potrs000176g35795 C2H2-type zinc finger

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC