Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potrs041203g25915
View in Genome Browser
Position
Potrs041203:2-112 (-)
110bp
Gene Type
gene
Gene Description (Protein Product)
Core histone H2A/H2B/H3/H4
Organism
Populus tremuloides
Also AS Potri.005G233900AT5G10390Potri.005G233900.v4.1

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs041406g26037 Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle
Potrs148625g27431 Histone-lysine n-methyltransferase
Potrs042352g36705 Histone H3.3-like
Regulatory gene
Potrs000130g30685 PHD zinc finger
Potrs000241g00339 transcription factor
Potrs000313g34139 Myb-related protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000122 negative regulation of transcription by RNA polymerase II BP
GO:0000183 rDNA heterochromatin formation BP
GO:0000228 nuclear chromosome CC
GO:0000785 chromatin CC
GO:0000786 nucleosome CC
GO:0000788 nucleosome CC
GO:0000790 chromatin CC
GO:0002682 regulation of immune system process BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003682 chromatin binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005694 chromosome CC
GO:0005700 polytene chromosome CC
GO:0006323 chromosome organization BP
GO:0006325 chromatin organization BP
GO:0006333 chromatin organization BP
GO:0006334 nucleosome assembly BP
GO:0006335 DNA replication-dependent chromatin assembly BP
GO:0006342 heterochromatin formation BP
GO:0006355 regulation of DNA-templated transcription BP
GO:0006357 regulation of transcription by RNA polymerase II BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006996 organelle organization BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007166 cell surface receptor signaling pathway BP
GO:0007596 blood coagulation BP
GO:0007599 hemostasis BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009611 response to wounding BP
GO:0009889 regulation of biosynthetic process BP
GO:0009890 negative regulation of biosynthetic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010558 negative regulation of macromolecule biosynthetic process BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010629 negative regulation of gene expression BP
GO:0016043 cellular component organization BP
GO:0016458 obsolete gene silencing BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019221 cytokine-mediated signaling pathway BP
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0022607 cellular component assembly BP
GO:0023052 signaling BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031327 negative regulation of cellular biosynthetic process BP
GO:0031490 chromatin DNA binding MF
GO:0031491 nucleosome binding MF
GO:0031492 nucleosomal DNA binding MF
GO:0031497 chromatin organization BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032501 multicellular organismal process BP
GO:0032991 protein-containing complex CC
GO:0032993 protein-DNA complex CC
GO:0034097 response to cytokine BP
GO:0034622 protein-containing complex assembly BP
GO:0034723 DNA replication-dependent chromatin assembly BP
GO:0034728 nucleosome organization BP
GO:0035059 RCAF complex CC
GO:0038111 interleukin-7-mediated signaling pathway BP
GO:0040029 epigenetic regulation of gene expression BP
GO:0042060 wound healing BP
GO:0042221 response to chemical BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044454 obsolete nuclear chromosome part CC
GO:0044464 obsolete cell part CC
GO:0044815 DNA packaging complex CC
GO:0044877 protein-containing complex binding MF
GO:0045595 regulation of cell differentiation BP
GO:0045637 regulation of myeloid cell differentiation BP
GO:0045652 regulation of megakaryocyte differentiation BP
GO:0045814 negative regulation of gene expression, epigenetic BP
GO:0045892 negative regulation of DNA-templated transcription BP
GO:0045934 negative regulation of nucleobase-containing compound metabolic process BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050817 coagulation BP
GO:0050878 regulation of body fluid levels BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051253 negative regulation of RNA metabolic process BP
GO:0051259 protein complex oligomerization BP
GO:0051262 protein tetramerization BP
GO:0051276 chromosome organization BP
GO:0051290 protein heterotetramerization BP
GO:0051291 protein heterooligomerization BP
GO:0051716 cellular response to stimulus BP
GO:0060147 regulation of post-transcriptional gene silencing BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060964 regulation of miRNA-mediated gene silencing BP
GO:0060966 regulation of gene silencing by RNA BP
GO:0060968 obsolete regulation of gene silencing BP
GO:0065003 protein-containing complex assembly BP
GO:0065004 protein-DNA complex assembly BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070013 intracellular organelle lumen CC
GO:0070887 cellular response to chemical stimulus BP
GO:0071103 DNA conformation change BP
GO:0071310 cellular response to organic substance BP
GO:0071345 cellular response to cytokine stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071824 protein-DNA complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0098760 response to interleukin-7 BP
GO:0098761 cellular response to interleukin-7 BP
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1902679 negative regulation of RNA biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903507 negative regulation of nucleic acid-templated transcription BP
GO:1903706 regulation of hemopoiesis BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000113 negative regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP