Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potrs041921g26310
View in Genome Browser
Position
Potrs041921:6780-7358 (+)
578bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the chalcone stilbene synthases family
Organism
Populus tremuloides
Also AS Potri.012G138800AT5G13930Potri.012G138800.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs146505g33824 Cinnamoyl-CoA reductase
Potrs153185g29377 Cinnamoyl-CoA reductase
Potrs153185g29377
Regulatory gene
Potrs000221g00273 Zinc-finger homeodomain protein
Potrs001433g02730 ZF-HD protein dimerisation region
Potrs002280g03817 tesmin TSO1-like CXC

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000325 plant-type vacuole CC
GO:0001101 response to acid chemical BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005783 endoplasmic reticulum CC
GO:0006810 transport BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009314 response to radiation BP
GO:0009411 response to UV BP
GO:0009416 response to light stimulus BP
GO:0009611 response to wounding BP
GO:0009628 response to abiotic stimulus BP
GO:0009629 response to gravity BP
GO:0009705 plant-type vacuole membrane CC
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009753 response to jasmonic acid BP
GO:0009812 flavonoid metabolic process BP
GO:0009813 flavonoid biosynthetic process BP
GO:0009889 regulation of biosynthetic process BP
GO:0009914 hormone transport BP
GO:0009926 auxin polar transport BP
GO:0009962 regulation of flavonoid biosynthetic process BP
GO:0010033 response to organic substance BP
GO:0010224 response to UV-B BP
GO:0010817 regulation of hormone levels BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0019222 regulation of metabolic process BP
GO:0031090 organelle membrane CC
GO:0031537 regulation of anthocyanin metabolic process BP
GO:0031540 regulation of anthocyanin biosynthetic process BP
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0050789 regulation of biological process BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0060918 auxin transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071704 organic substance metabolic process BP
GO:0080090 regulation of primary metabolic process BP
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:1901576 organic substance biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map04712 Circadian rhythm - plant -
map01110 Biosynthesis of secondary metabolites -
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00960 Tropane, piperidine and pyridine alkaloid biosynthesis -
map00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis Stilbenoids are a group of phenolic compounds, biosynthetically interrelated through their common origin from a C6-C2-C6 intermediate, such as resveratol found in grapes. Stilbenoids can also exist as glycosides (e.g., piceid). Combretastatins are potentially useful stilbenoid natural products with known antitumor activity. Diarylheptanoid is a compound group having phenyl rings at 1,7 positions of n-heptane (C6-C7-C6), such as curcumin found in the ginger family. [6]-Gingerol is a major active component of ginger and has diverse pharmacologic effects.
map00941 Flavonoid biosynthesis Flavonoids are a major class of plant secondary metabolites that serves a multitude of functions including pigments and antioxidant activity. Flavonoids are synthesized from phenylpropanoid derivatives by condensation with malonyl-CoA. For example, condensation of p-coumaroyl-CoA (C6-C3) with three malonyl-CoA (C3) molecules results in naringenin chalcone with a diphenylpropane (C6-C3-C6) unit, which is converted to naringenin with the flavone (2-phenylchromen-4-one) backbone by conjugate ring closure. These and further modifications yield a variety of structural forms including chalcones, flavanones, dihyroflavonols, and flavans, anthocyanins, flavones and flavonols, and isoflavonoids.