Basic Information
Gene ID
Potrs042643g26792
Position
Potrs042643:1-3239 (-)
3238bp
Gene Type
gene
Gene Description (Protein Product)
Pentatricopeptide repeat-containing protein
Organism
Also AS Potri.006G247400AT5G11310Potri.006G247400.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs042741g35369 Transcription elongation factor
Regulatory gene
Potrs000045g00007 transcription factor
Potrs000124g00190 B3 DNA binding domain
Potrs000160g00198 AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003824 catalytic activity MF
GO:0004518 nuclease activity MF
GO:0004519 endonuclease activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009451 RNA modification BP
GO:0009787 regulation of abscisic acid-activated signaling pathway BP
GO:0009788 negative regulation of abscisic acid-activated signaling pathway BP
GO:0009791 post-embryonic development BP
GO:0009845 seed germination BP
GO:0009966 regulation of signal transduction BP
GO:0009968 negative regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010029 regulation of seed germination BP
GO:0010646 regulation of cell communication BP
GO:0010648 negative regulation of cell communication BP
GO:0016070 RNA metabolic process BP
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0023051 regulation of signaling BP
GO:0023057 negative regulation of signaling BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0065007 biological regulation BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:0090305 nucleic acid phosphodiester bond hydrolysis BP
GO:0090351 seedling development BP
GO:0097159 organic cyclic compound binding MF
GO:1900140 regulation of seedling development BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901419 regulation of response to alcohol BP
GO:1901420 negative regulation of response to alcohol BP
GO:1905957 regulation of cellular response to alcohol BP
GO:1905958 negative regulation of cellular response to alcohol BP
GO:2000026 regulation of multicellular organismal development BP