Basic Information
Gene ID
Potrs042661g26821
Position
Potrs042661:13989-15341 (+)
1352bp
Gene Type
gene
Gene Description (Protein Product)
PHD finger-like domain-containing protein
Organism
Also AS Potri.001G277700AT1G07170Potri.001G277700.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs148414g27386 Small nuclear ribonucleoprotein
Potrs042932g27001 DNA-damage-repair toleration protein DRT111
Potrs042911g27014 U2 small nuclear ribonucleoprotein
Regulatory gene
Potrs000037g00005 methyltransferase At2g41040, chloroplastic-like
Potrs000045g00007 transcription factor
Potrs000102g00100 LOB domain-containing protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.