Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potrs042707g26839
View in Genome Browser
Position
Potrs042707:16401-21481 (+)
5080bp
Gene Type
gene
Gene Description (Protein Product)
ATP-dependent protease La (LON) substrate-binding domain
Organism
Populus tremuloides
Also AS Potri.018G046700AT2G25740Potri.018G046700.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs042833g26975 DDB1- and CUL4-associated factor
Potrs148424g37372 COP9 signalosome complex subunit
Potrs128043g33315 The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
Regulatory gene
Potrs000037g00005 methyltransferase At2g41040, chloroplastic-like
Potrs000058g00096 Growth-regulating factor
Potrs000108g00058 Protein TRANSPARENT TESTA

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000151 ubiquitin ligase complex CC
GO:0002009 morphogenesis of an epithelium BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0006464 protein modification process BP
GO:0006508 proteolysis BP
GO:0006511 ubiquitin-dependent protein catabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0007423 sensory organ development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009790 embryo development BP
GO:0009887 animal organ morphogenesis BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010498 proteasomal protein catabolic process BP
GO:0016567 protein ubiquitination BP
GO:0019538 protein metabolic process BP
GO:0019941 modification-dependent protein catabolic process BP
GO:0030163 protein catabolic process BP
GO:0031461 cullin-RING ubiquitin ligase complex CC
GO:0031464 Cul4A-RING E3 ubiquitin ligase complex CC
GO:0032446 protein modification by small protein conjugation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0033333 fin development BP
GO:0033334 fin morphogenesis BP
GO:0033339 pectoral fin development BP
GO:0035107 appendage morphogenesis BP
GO:0035113 embryonic appendage morphogenesis BP
GO:0035118 embryonic pectoral fin morphogenesis BP
GO:0035138 pectoral fin morphogenesis BP
GO:0035239 tube morphogenesis BP
GO:0035295 tube development BP
GO:0036211 protein modification process BP
GO:0042471 ear morphogenesis BP
GO:0042472 inner ear morphogenesis BP
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0043583 ear development BP
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048513 animal organ development BP
GO:0048562 embryonic organ morphogenesis BP
GO:0048568 embryonic organ development BP
GO:0048598 embryonic morphogenesis BP
GO:0048729 tissue morphogenesis BP
GO:0048731 system development BP
GO:0048736 appendage development BP
GO:0048839 inner ear development BP
GO:0048856 anatomical structure development BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0060173 limb development BP
GO:0060429 epithelium development BP
GO:0060562 epithelial tube morphogenesis BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071599 otic vesicle development BP
GO:0071600 otic vesicle morphogenesis BP
GO:0071704 organic substance metabolic process BP
GO:0080008 Cul4-RING E3 ubiquitin ligase complex CC
GO:0090596 sensory organ morphogenesis BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC