Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potrs042708g26842
View in Genome Browser
Position
Potrs042708:4843-5960 (+)
1117bp
Gene Type
gene
Gene Description (Protein Product)
Pectate lyase superfamily protein
Organism
Populus tremuloides
Also AS Potri.014G162300AT1G78400Potri.014G162300.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrs144451g27141 Polygalacturonase-like
Potrs145381g27186 UDP-glycosyltransferase 76F1-like
Potrs042709g26856 Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties
Regulatory gene
Potrs000058g00096 Growth-regulating factor
Potrs000330g00411 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Potrs000334g00734 Transcription factor TCP9-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -