PPGR - Gene Detail

Basic Information

Gene ID	Potrs148138g37343 View in Genome Browser
Position	Potrs148138:10799-11005 (+) 206bp
Gene Type	gene
Gene Description (Protein Product)	DNA-directed RNA polymerase
Organism	Populus tremuloides
Also AS	Potri.013G140260ATCG00170Potri.013G140260.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Potrs149047g27467 RNA polymerase subunit alpha

Potrs149044g27461 Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity)

Potrs148139g27406 Ribosomal protein S4/S9 N-terminal domain

Regulatory gene

Potrs000389g00482 Dof domain, zinc finger

Potrs000883g01405 dof zinc finger protein

Potrs000913g29758 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000428	DNA-directed RNA polymerase complex	CC
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0030880	RNA polymerase complex	CC
GO:0032991	protein-containing complex	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0061695	transferase complex, transferring phosphorus-containing groups	CC
GO:1902494	catalytic complex	CC
GO:1990234	transferase complex	CC

KEGG Term	Name	Description
map03020	RNA polymerase	-