Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.001G017300
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Position
Chr01:1272014-1275086 (-)
3072bp
Gene Type
gene
Gene Description (Protein Product)
transcription factor
Organism
Populus trichocarpa
Also AS Potri.001G017300AT1G51140Potri.001G017300.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.001G122800 Scarecrow-like protein
Potri.003G110800 Scarecrow-like protein
Potri.013G126300 Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl-tRNAi to 40S ribosomal subunits. In contrast to the eIF- 2 complex, it binds methionyl-tRNAi to 40 S subunits in a codon- dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40 S subunits in a GTP-dependent manner. May act by impiging the expression of specific proteins
Regulatory gene
Potri.001G019200 Myb/SANT-like DNA-binding domain
Potri.001G026000 Myb/SANT-like DNA-binding domain
Potri.001G028400 Myb/SANT-like DNA-binding domain
Target gene
Potri.001G001500 E3 ubiquitin-protein ligase
Potri.001G004000 Protein of unknown function (DUF1639)
Potri.001G008160 Cotton fibre expressed protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)