Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.001G080300
View in Genome Browser
Position
Chr01:6389036-6391615 (+)
2579bp
Gene Type
gene
Gene Description (Protein Product)
"SANT SWI3
Organism
Populus trichocarpa
Also AS Potri.001G080300AT5G61620Potri.001G080300.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.001G082600 Protein BRANCHLESS TRICHOME
Potri.001G107500 Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase
Potri.001G358100 Protein BREAST CANCER SUSCEPTIBILITY 1 homolog
Regulatory gene
Potri.001G058200 MADS-box protein
Potri.001G058400 Agamous-like MADS-box protein AGL9 homolog
Potri.001G086400 Dof zinc finger protein
Target gene
Potri.001G000800 Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Potri.001G001201 Nuclear pore complex protein
Potri.001G001250 Nuclear pore complex protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)