Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.002G171500
View in Genome Browser
Position
Chr02:13196017-13199483 (-)
3466bp
Gene Type
gene
Gene Description (Protein Product)
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates
Organism
Populus trichocarpa
Also AS Potri.002G171500AT3G61790Potri.002G171500.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.013G161700 Light-mediated development protein
Potri.007G065400 NAC domain-containing protein 21
Potri.005G098200 NAC domain-containing protein 21
Regulatory gene
Potri.001G005100 transcription repressor
Potri.001G035800 dnaJ homolog subfamily C member
Potri.001G036000 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)