Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.003G142100
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Position
Chr03:15770823-15776086 (+)
5263bp
Gene Type
gene
Gene Description (Protein Product)
Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Organism
Populus trichocarpa
Also AS Potri.003G142100AT4G23980Potri.003G142100.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.006G161400 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Potri.013G041400 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Potri.005G053900 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Regulatory gene
Potri.001G086400 Dof zinc finger protein
Potri.001G238400 Dof zinc finger protein
Potri.001G322700 B3 domain-containing transcription factor
Target gene
Potri.001G001201 Nuclear pore complex protein
Potri.001G001250 Nuclear pore complex protein
Potri.001G007300 polyamine transporter At3g13620

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)