Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.012G002200
View in Genome Browser
Position
Chr12:1170968-1180010 (+)
9042bp
Gene Type
gene
Gene Description (Protein Product)
Cyclic nucleotide-gated ion channel 1-like
Organism
Populus trichocarpa
Also AS Potri.012G002200AT5G53130Potri.012G002200.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.017G036800 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
Potri.017G135600 Ubiquitin-2 like Rad60 SUMO-like
Potri.016G088100 Ubiquitin-2 like Rad60 SUMO-like
Regulatory gene
Potri.001G018400 AP2-like ethylene-responsive transcription factor
Potri.001G041500 AP2-like ethylene-responsive transcription factor
Potri.001G058200 MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)