Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.016G041200
View in Genome Browser
Position
Chr16:2594118-2597222 (-)
3104bp
Gene Type
gene
Gene Description (Protein Product)
H ACA ribonucleoprotein complex subunit
Organism
Populus trichocarpa
Also AS Potri.016G041200AT3G57150Potri.016G041200.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.019G034900 Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1
Potri.017G017700 ribosome biogenesis protein
Potri.019G047300 Transducin beta-like protein
Regulatory gene
Potri.001G086400 Dof zinc finger protein
Potri.001G238400 Dof zinc finger protein
Potri.001G322700 B3 domain-containing transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)