Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.016G046600
View in Genome Browser
Position
Chr16:2978494-2982264 (-)
3770bp
Gene Type
gene
Gene Description (Protein Product)
zinc finger CCCH domain-containing protein
Organism
Populus trichocarpa
Also AS Potri.016G046600AT3G12130Potri.016G046600.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.017G051600 polyadenylate-binding protein
Potri.017G140000 expansin-A13-like
Potri.018G128300 Belongs to the actin family
Regulatory gene
Potri.001G018400 AP2-like ethylene-responsive transcription factor
Potri.001G041500 AP2-like ethylene-responsive transcription factor
Potri.001G066200 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Target gene
Potri.001G020250
Potri.001G026000 Myb/SANT-like DNA-binding domain
Potri.001G030000 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)