Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.016G048500
View in Genome Browser
Position
Chr16:3122071-3126086 (+)
4015bp
Gene Type
gene
Gene Description (Protein Product)
Squamosa promoter-binding-like protein
Organism
Populus trichocarpa
Also AS Potri.016G048500AT2G42200Potri.016G048500.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.016G090300 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Potri.017G081000 Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain
Potri.T124608 high affinity nitrate transporter
Regulatory gene
Potri.001G058200 MADS-box protein
Potri.001G058400 Agamous-like MADS-box protein AGL9 homolog
Potri.001G086400 Dof zinc finger protein
Target gene
Potri.001G003800 Neprosin
Potri.001G015000 -
Potri.001G016100 -

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)