Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.016G078600
View in Genome Browser
Position
Chr16:5961917-5971724 (+)
9807bp
Gene Type
gene
Gene Description (Protein Product)
Signal recognition particle 54 kDa protein
Organism
Populus trichocarpa
Also AS Potri.016G078600AT5G03940Potri.016G078600.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.016G112800 Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein)
Potri.018G097500 Preprotein translocase subunit SCY1
Potri.017G113300 protein domain specific binding
Regulatory gene
Potri.001G086400 Dof zinc finger protein
Potri.001G133900 GAGA binding protein-like family
Potri.001G173600 Tesmin/TSO1-like CXC domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)