Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.016G080600
View in Genome Browser
Position
Chr16:6205927-6210467 (-)
4540bp
Gene Type
gene
Gene Description (Protein Product)
Pectate lyase
Organism
Populus trichocarpa
Also AS Potri.016G080600AT3G55140Potri.016G080600.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.017G006400 Polygalacturonase-like
Potri.018G068400 pectinesterase
Potri.017G087300 Pectinesterase
Regulatory gene
Potri.001G018400 AP2-like ethylene-responsive transcription factor
Potri.001G041500 AP2-like ethylene-responsive transcription factor
Potri.001G058200 MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)