Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.018G001000
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Position
Chr18:85775-90138 (-)
4363bp
Gene Type
gene
Gene Description (Protein Product)
endonuclease
Organism
Populus trichocarpa
Also AS Potri.018G001000AT4G31150Potri.018G001000.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.019G034900 Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1
Potri.019G024200 Translational activator
Potri.018G138000 Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
Regulatory gene
Potri.001G053500 GATA transcription factor
Potri.001G086400 Dof zinc finger protein
Potri.001G151700 GATA transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)