Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.018G028100
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Position
Chr18:2090072-2096662 (-)
6590bp
Gene Type
gene
Gene Description (Protein Product)
Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs)
Organism
Populus trichocarpa
Also AS Potri.018G028100AT3G49500Potri.018G028100.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.018G137400 Protein SUPPRESSOR OF GENE SILENCING
Potri.T045700 Protein SUPPRESSOR OF GENE SILENCING
Potri.018G083900 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Regulatory gene
Potri.001G133900 GAGA binding protein-like family
Potri.002G026700 Protein BASIC PENTACYSTEINE6-like
Potri.004G163700 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)