Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.019G056300
View in Genome Browser
Position
Chr19:9494736-9500825 (-)
6089bp
Gene Type
gene
Gene Description (Protein Product)
Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs
Organism
Populus trichocarpa
Also AS Potri.019G056300AT5G01230Potri.019G056300.v4.1

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.019G104400 H ACA ribonucleoprotein complex non-core subunit
Potri.019G076200 Non-catalytic subunit of the queuine tRNA- ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, - His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7- deazaguanosine)
Potri.T125906 Uridine 5-monophosphate
Regulatory gene
Potri.001G047500 ZINC FINGER protein
Potri.001G058200 MADS-box protein
Potri.001G058400 Agamous-like MADS-box protein AGL9 homolog

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)