PPGR - Gene Detail

Basic Information

Gene ID	gene-GBA52_001278 View in Genome Browser
Position	CM035466.1:10850319-10855971 (+) 5652bp
Gene Type	gene
Gene Description (Protein Product)	Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi trans-Golgi network (TGN) and or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules
Organism	Prunus armeniaca
Also AS	MD15G1098200AT5G11490PRUPE_1G453100

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-GBA52_016191 Belongs to the adaptor complexes medium subunit family

gene-GBA52_022744 Belongs to the adaptor complexes small subunit family

gene-GBA52_020821 Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome

Regulatory gene

gene-GBA52_000447 Agamous-like MADS-box protein

gene-GBA52_000461 Agamous-like MADS-box protein AGL12

gene-GBA52_000769 MADS-box transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0019899	enzyme binding	MF
GO:0019900	kinase binding	MF
GO:0019901	protein kinase binding	MF
GO:0043424	protein histidine kinase binding	MF