PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Gene ID	gene-GBA52_001956 View in Genome Browser
Position	CM035466.1:14764494-14765573 (+) 1079bp
Gene Type	gene
Gene Description (Protein Product)	Zinc-finger homeodomain protein
Organism	Prunus armeniaca
Also AS	MD08G1030700AT1G75240PRUPE_1G378200

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	gene-GBA52_023390 Zinc-finger homeodomain protein gene-GBA52_002912 Zinc-finger homeodomain protein gene-GBA52_019961 ZF-HD protein dimerisation region
Regulatory gene	gene-GBA52_002041 Protein BASIC PENTACYSTEINE6-like gene-GBA52_002344 Protein BASIC PENTACYSTEINE2-like gene-GBA52_026930 Protein BASIC PENTACYSTEINE4-like
Target gene	gene-GBA52_000035 zinc finger CCCH domain-containing protein gene-GBA52_000046 Belongs to the glycosyl hydrolase 1 family gene-GBA52_000139

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0042802	identical protein binding	MF
GO:0042803	protein homodimerization activity	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0046983	protein dimerization activity	MF
GO:0097159	organic cyclic compound binding	MF
GO:1901363	heterocyclic compound binding	MF