Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-GBA52_005562
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Position
CM035466.1:47167528-47168655 (+)
1127bp
Gene Type
gene
Gene Description (Protein Product)
leucine-rich repeat extensin-like protein
Organism
Prunus armeniaca
Also AS MD16G1198100AT3G22800PRUPE_1G019600

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-GBA52_009458 Required for the assembly and or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits
gene-GBA52_008279 40S ribosomal protein
gene-GBA52_017685 40s ribosomal protein
Regulatory gene
gene-GBA52_000574 GATA transcription factor
gene-GBA52_000575 GATA transcription factor
gene-GBA52_000588 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005199 structural constituent of cell wall MF