Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-GBA52_006403
View in Genome Browser
Position
CM035469.1:3597952-3600837 (-)
2885bp
Gene Type
gene
Gene Description (Protein Product)
DNA-directed RNA polymerase III subunit
Organism
Prunus armeniaca
Also AS MD07G1251400AT4G25180PRUPE_2G275200

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-GBA52_023425 DNA-directed RNA polymerase III subunit
gene-GBA52_008558 DNA-directed RNA polymerase
gene-GBA52_014661 DNA-directed RNA polymerases
Regulatory gene
gene-GBA52_000014 NAC domain-containing protein
gene-GBA52_000026 Zinc-finger homeodomain protein
gene-GBA52_000125 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000428 DNA-directed RNA polymerase complex CC
GO:0001817 regulation of cytokine production BP
GO:0001819 positive regulation of cytokine production BP
GO:0002682 regulation of immune system process BP
GO:0002684 positive regulation of immune system process BP
GO:0003674 molecular_function MF
GO:0003682 chromatin binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005666 RNA polymerase III complex CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0008150 biological_process BP
GO:0016604 nuclear body CC
GO:0016607 nuclear speck CC
GO:0030880 RNA polymerase complex CC
GO:0031347 regulation of defense response BP
GO:0031349 positive regulation of defense response BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032479 regulation of type I interferon production BP
GO:0032481 positive regulation of type I interferon production BP
GO:0032648 regulation of interferon-beta production BP
GO:0032728 positive regulation of interferon-beta production BP
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044451 obsolete nucleoplasm part CC
GO:0044464 obsolete cell part CC
GO:0045088 regulation of innate immune response BP
GO:0045089 positive regulation of innate immune response BP
GO:0048518 positive regulation of biological process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0050776 regulation of immune response BP
GO:0050778 positive regulation of immune response BP
GO:0050789 regulation of biological process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0055029 nuclear DNA-directed RNA polymerase complex CC
GO:0061695 transferase complex, transferring phosphorus-containing groups CC
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0080134 regulation of response to stress BP
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC
KEGG Term Name Description
map03020 RNA polymerase -