Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-GBA52_006635
View in Genome Browser
Position
CM035469.1:4777525-4780330 (-)
2805bp
Gene Type
gene
Gene Description (Protein Product)
PHD finger protein ALFIN-LIKE
Organism
Prunus armeniaca
Also AS MD01G1153500AT5G05610PRUPE_2G250800

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-GBA52_016020 Retinoblastoma-binding protein
gene-GBA52_014768 SPRY domain
gene-GBA52_022919 PHD finger protein ALFIN-LIKE
Regulatory gene
gene-GBA52_000535 Encoded by
gene-GBA52_001408 B3 domain-containing protein At3g19184-like
gene-GBA52_001870 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001067 transcription regulatory region nucleic acid binding MF
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0035064 methylated histone binding MF
GO:0042393 histone binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043565 sequence-specific DNA binding MF
GO:0044212 transcription cis-regulatory region binding MF
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0097159 organic cyclic compound binding MF
GO:0140030 modification-dependent protein binding MF
GO:0140034 methylation-dependent protein binding MF
GO:1901363 heterocyclic compound binding MF