Basic Information
Gene ID
gene-GBA52_013040
Position
CM035467.1:5927381-5929600 (-)
2219bp
Gene Type
gene
Gene Description (Protein Product)
May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins
Organism
Also AS MD05G1343600AT4G04860PRUPE_4G023300

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-GBA52_022735 May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins
gene-GBA52_019641 Cell division
gene-GBA52_017382 Cell division cycle protein 48 homolog
Regulatory gene
gene-GBA52_000267 Ethylene-responsive transcription factor SHINE
gene-GBA52_000475 ethylene-responsive transcription factor
gene-GBA52_000479 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map04141 Protein processing in endoplasmic reticulum The endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylated. Correctly folded proteins are packaged into transport vesicles that shuttle them to the Golgi complex. Misfolded proteins are retained within the ER lumen in complex with molecular chaperones. Proteins that are terminally misfolded bind to BiP and are directed toward degradation through the proteasome in a process called ER-associated degradation (ERAD). Accumulation of misfolded proteins in the ER causes ER stress and activates a signaling pathway called the unfolded protein response (UPR). In certain severe situations, however, the protective mechanisms activated by the UPR are not sufficient to restore normal ER function and cells die by apoptosis.