Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-GBA52_018345
View in Genome Browser
Position
CM035465.1:2034620-2037812 (-)
3192bp
Gene Type
gene
Gene Description (Protein Product)
riboflavin biosynthesis protein
Organism
Prunus armeniaca
Also AS MD13G1061000AT3G47390PRUPE_6G362000

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-GBA52_026762 riboflavin biosynthesis protein
gene-GBA52_026703 riboflavin biosynthesis protein
gene-GBA52_018366 Haloacid dehalogenase-like hydrolase
Regulatory gene
gene-GBA52_000122 ZINC FINGER protein
gene-GBA52_000429 Zinc finger protein
gene-GBA52_000574 GATA transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004159 dihydropyrimidine dehydrogenase (NAD+) activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009451 RNA modification BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009987 cellular process BP
GO:0016070 RNA metabolic process BP
GO:0016491 oxidoreductase activity MF
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors MF
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor MF
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds MF
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00740 Riboflavin metabolism -